Recent Posts

Genetic components of root architecture remodeling in response to salt stress

While everyone knows that salt stress reduces root growth, Julkowska and colleagues examined salt-stress induced changes in Root System Architecture (RSA) by studying 347 Arabidopsis accessions. The authors collected 17 RSA traits and developed an app allowing interactive exploration of collected…

Inhibition of RNA polymerase II allows controlled mobilization of retrotransposons for plant breeding

The lack of acceptance of GM-breeding calls for alternative strategies to develop new crop varieties to feed the world's growing population. Moreover, the regulation of novel approaches for genome editing (CRISPR, TALEN) is still unclear and will potentially remain so for the near future (or will likely…

Recombination between members of Onsen family

Plant genomes are largely remnants of transposons of varying ages, some of which are presumed to be no longer capable of transposition. Sanchez et al. examined the family of Onsen retrotransposons to determine which members retain activity. They prompted transposition through heat treatment in a mutant…

Amplification of plant disease-resistance genes in pepper is intimately linked to transposon activity

Peppers are an economically and ecologically important crop plants, but genomic resources are rather scarce. The authors provide here new reference genome sequences for three species of hot pepper (Capsicum baccatum, C. chinense and C. annuum), identifying evolutionary forces that have shaped pepper…

How asparagus recently changed its lifestyle from hermaphroditism to distinct males and females

Sex determination in the animal kingdom has been relatively well studied, with two main systems responsible for the sexes in mammals, insects, birds, reptiles and fish; XY and ZW sex-determination. Although much is still unknown about these systems, with many exceptions being discovered to previously…

Complex evolutionary history and targets of domestication in the cultivated potato

Potatoes originated in the Andes of southern Peru, and are now the third most important crop for direct human consumption. Hardigan et al. sequenced 67 potato relatives, including South American landraces, North American cultivars and wild-diploid species to learn about the genetics of modern potato’s…

Canalization of tomato fruit metabolism

Plants are noted for their phenotypic plasticity, but there are also examples of phenotypic canalization, which Alseekh et al. define as “the property of those phenotypic traits showing no environmental effect when individuals of a specific genotype are exposed to a set of different environments.”…

Review: The genetics of drought tolerance in conifers

Changing climates mean changing rainfall patterns, which can have serious consequences for long-lived plants such as conifers. Moran et al. provide a thoughtful and readable overview of the strategies that enable some conifer species to survive drought. They start by discussing the different definitions…

Natural variation identified genes affecting drought-induced abscisic acid accumulation in Arabidopsis thaliana ($)

Dissecting the genetic controls of ABA is challenging, granted the complex modulation of ABA turnover and redundancy of the hormone perception machinery. In the recent study, Kalladan and colleagues explored natural variation of low-water-potential induced ABA accumulation. Using heuristic GWAS,…