Recent Posts

Semi-annotated metabolomics facilitates specialized metabolic gene and pathway elucidation

Anting Zhu et al. establish an approach to identify metabolites and their corresponding genes and pathways in wheat. https://doi.org/10.1093/plcell/koad286 By A. Zhu, M. Liu, Z. Tian, W. Liu, W. Chen et al.  National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene…

Review: Synthetic algal genomes

As photosynthetic organisms, algae can harness solar energy to do useful things, from environmental cleanup to producing fuels and other beneficial molecules. This review by Goold et al. provides an overview of how algae can be valuable platforms for synthetic biology and metabolic engineering through…

Review: Integrative framework for successful deployment of microbiomes in agriculture

This review by Berruto and Demirer calls for an interdisciplinary approach at the interface of experimental and computational frameworks to address the long-standing challenge of field application of beneficial soil microbiomes. This challenge persists due to our limited understanding of the complex…

Review: Deep learning in image-based plant phenotyping

As a writer and an editor, I am horrified by the idea that thinking can be replaced by artificial intelligence. But I do recognize that deep learning / machine learning / artificial intelligence can provide major opportunities for data analysis, as eloquently described in this review article by Murphy…

Understanding the role of metabolites in the evolution of C4 photosynthesis

Plants that use C4 photosynthesis, whereby carbon is concentrated around RuBisCo in bundle sheath cells, have high water and nitrogen use efficiencies. Thus, understanding how C4 photosynthesis evolves is of much interest. The Flaveria genus provides a unique opportunity for this, as it contains species…

Functional insights into the TPLATE complex: A key player in clathrin-mediated endocytosis in plant cells

Transporting cargo within a cell may seem straightforward, but it is actually an intricate task. At the plasma membrane in plant cells, this complexity is navigated by a process known as clathrin-mediated endocytosis. Central to this process are two key players: adapter protein AP-2 and the TSET/TPLATE…

Every pair is special!

The identification and characterization of resistosome complexes, formed by the oligomerization of intracellular nucleotide-binding leucine-rich repeat receptors (NLRs), has recently been a major focus in the field of plant immunity. Some NLR genes occur as head-to-head pairs encoding proteins that function…

A diffusible small-RNA-based Turing system dynamically coordinates organ polarity

The establishment of adaxial-abaxial polarity during the growth of the leaf primordium is a prerequisite for the formation of the flat, thin leaves observed in most (but not all) plants. The micro-RNAs tasiARF and miR165/6, which form concentration gradients within leaf primordia, are major contributors…

Shade avoidance responses in Chinese white poplar rely on shared and unique roles of phytochrome-interacting factors

Shade avoidance syndrome (SAS) is a set of adaptive growth responses to low red to far-red light ratios. SAS includes petiole and internode lengthening and upward bending of leaves (hyponasty). In Arabidopsis, PHYTOCHROME B (PHYB) and PHYTOCHROME INTERACTING FACTORS (PIFs) are implicated in these responses.…