Recent Posts

Review: Secrets of succulence ($)

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“Succulence is a phenomenon that has long eluded a decisive consensus definition,” begins Males in his review of the physiology and evolutionary developmental biology of succulence. Succulence can broadly be defined as the storage of water such that the plant can maintain physiological activity in…

Review: Root branching plasticity: collective decision-making results from local and global signalling

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Roots are extraordinary examples of developmental plasticity, and hundreds of papers have reported on the mechanisms by which root system architecture responds to the environment and the global nutritional status of the plant. McCleery et al. propose a model that synthesizes evidence of intrinsic, local…

Review: Ammonium as a signal for physiological and morphological responses ($)

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Ammonium is one of the major forms in which nitrogen is assimilated. Besides being a nutrient, it also acts as signal that affects gene expression and root system architecture. Some ammonium-induced genes are also induced by low pH (ammonium acidifies the apoplast), whereas others are specifically induced…

Shoot-to-root mobile polypeptides involved in systemic regulation of nitrogen acquisition ($)

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To balance nutrient uptake (usually from heterogeneous sources) with nutrient demand, plants use a root-shoot-root signaling pathway. Previously, a root-to-shoot mobile peptide C-TERMINALLY ENCODED PEPTIDE (CEP) was shown to translocate from N-starved roots to the shoot, where it interacts with a leucine-rich…

Changes in the chloroplastic CO2 concentration explain much of the observed Kok effect: a model ($)

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When the uptake of CO2 (A) is plotted against absorbed irradiance (I), at low I there is a noticeable bend that occurs around the light compensation point (I where CO2 release due to mitochondrial respiration is balanced by CO2 uptake by photosynthesis). When the slopes of both parts of the curve are…

TOPLESS mediates brassinosteroid control of shoot boundaries and root meristem development

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Steroids play a role as essential hormones in plants as well as in animals. In plants, steroids termed brassinosteroids (BR) regulate plant growth and development. BR has been shown to be involved in many processes such as light response, stomata and root development, and flowering in plants. BR-regulated…

Identification of Arabidopsis genic and non-genic promoters

A promoter is a region that “determines the position, direction, frequency, and timing of transcription”.  A cell can decode the sequence of the promoter to ensure appropriate transcription, but we still can’t. Tokizawa et al. performed a large-scale survey of promoters by sequencing regions upstream…

Hierarchically aligning 10 legume genomes establishes a family-level genomics platform

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Many legumes are important crops, and to date ten legume genomes have been sequenced, including soybean, common bean, mung bean, and two species of wild peanut. Wang et al. used hierarchical comparative genomics analysis of the ten legume genomes, which enabled them to detected gene colinearity between…

Opinion: Increasing crop yield and resilience with trehalose 6-phosphate ($)

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Trehalose 6-phosphate (T6P) is a disaccharide formed from two glucose sugars, and more importantly is a signal of glucose availability and regulator of energy homeostasis. Acting via the protein kinase SnRK1, T6P controls the allocation of carbon, leading the plant down a “feast” (growth) or “famine”…