Recent Posts

Conservation of Genomic Imprinting during Wheat Polyploidization

Yang et al. discover conservation of genomic imprinting between closely related Triticum and Aegilops species. https://doi.org/10.1105/tpc.17.00837 By Guanghui Yang and Mingming Xin Background: Genomic imprinting causes genes to be differentially expressed depending on their parent-of-origin, which…

Genetic conservation, turnover and innovation across the genus Oryza (Nature Genetics)

In order to use wild rice relatives for future crop improvement, the differences and similarities between wild and domesticated genomes need to be understood. Stein and colleagues sequenced the genomes of two domesticated varieties and seven wild species, unraveling 15 million years of evolutionary history…

Duplicate Genomes Evolved Differently in Maize and Soybean

Zhao et al. demonstrate that duplicated genomes in maize and soybean followed distinct trajectories over millions of years https://doi.org/10.1105/tpc.17.00595 By Meixia Zhao, Biao Zhang, Damon Lisch, and Jianxin Ma Background: Over evolutionary time, many organisms, particularly plants, have periodically…

Maize adaptation to higher latitudes has been facilitated by transposon activities.

Proc. Natl. Acad. Sci. USA. Flowering is a major determinant of crop adaptation to new environments. Starting from its tropical origins and requirement for short-day conditions to flower, natural selection and breeding have allowed maize to adapt to long-day environments and thus be grown over a wider…

Gene duplication and aneuploidy trigger rapid evolution of herbicide resistance in common waterhemp

Plant Physiol. Herbicide resistance is a serious problem in contemporary agriculture. One of the most widely used herbicides, glyphosate, interferes with the activity of EPSPS (5-enolpyruvylshikimate-3-phosphate synthase). Koo et al. previously showed that glyphosate-resistant waterhemp (Amaranthus tuberculatus,…

Evolution of transposon-encoded anti-silencing factors in Arabidopsis ($)

Transposable elements (TEs) are a major component of eukaryotic genomes. Their activity is silenced by epigenetic mechanisms such as chromatin modifications and DNA methylation in order to avoid deleterious effects on host genome stability. Nevertheless, how TEs overcome silencing by the host and propagate…

What We're Reading: January 5th

Guest Editor:  Alecia Biel Alecia is a graduate student at The Ohio State University in the US and has been a Plantae Fellow since September 2017.  Her research focuses on elucidating hormone signaling pathways and the role of the nucleus during this process, particularly throughout plant abiotic…

Review. Grasses: The original Vikings ($)

The Vikings were notorious raiders for centuries, pillaging and looting the shores throughout the northern hemisphere. Through their successful raids, the Vikings established colonies that grew into states and countries, among these Normandy, England, Sicily, and Russia. The success of the Vikings is…

Patterns and consequences of subgenome differentiation provide insights into the nature of paleopolyploidy in plants

Many plants are polyploid, meaning that instead of the normal, diploid “2n” complement of chromosomes (one from each parent), they have more than 2n. Following whole-genome duplication, redundancy can allow the duplicated regions to diverge or become silenced. In some cases, silencing occurs preferentially…