Recent Posts

Ten simple rules for writing a response to reviewers

Another excellent entry in PLOS Computational Biology's "Ten Simple Rules" series. Read "Ten simple rules for writing a response to reviewers" here. Short version: Rule 1: Provide an overview, then quote the full set of reviews Rule 2: Be polite and respectful of all reviewers Rule 3: Accept…

Update: Flower primary metabolism, pollinators’ preferences and seed and fruit set

Because of their important roles in attracting pollinators, the secondary or specialized metabolites of flowers (color, fragrance) get a lot of attention. Borghi and Fernie argue that flower function is equally dependent on primary (central) metabolites, which not only provide the precursors for secondary…

Insights into land plant evolution garnered from the Marchantia polymorpha genome

The liverwort Marchantia polymorpha is a fascinating plant for many reasons, including the fact that it is one of the earliest terrestrial species that split off from the rest of the land plants. Therefore, comparisons between Marchantia and green algae or Marchantia and the rest of the land plants tell…

Insights into plasmodesmata composition of fully developed Arabidopsis thaliana leaves

Plasmodesmata (PD) are complex, regulated channels between plant cells that facilitate the movement of signals, metabolites and pathogens, but their small size makes them difficult to study. Previously, Kraner et al. identified an Arabidopsis mutant that produced fewer, simpler plasmodesmata. In their…

Pectinase function in growth and stomatal dynamics

Pectin is a polymer that holds cell walls together and stiffens the walls, but what happens when those cell walls need to move, for example when cells (including guard cells) expand? Rui et al. started with a guard-cell specific transcriptome to identify genes encoding cell-wall modifying enzymes. They…

Ectopic expression of WINDING 1 leads to asymmetrical distribution of auxin and a spiral phenotype in rice

Through insertional mutagenesis of rice, Cheng et al. identified a BTBN (Brac/Tramtrack/Broad complex and NPH3 domain)-encoding gene which they named WINDING 1 (WIN1), because the mutant phenotype (caused by ectopic expression in the shoot) causes the shoot to grow in a spiral. Ectopic expression of…

In vivo gibberellin gradients visualized in rapidly elongating tissues

Biosensors can reveal cellular or even sub-cellular distributions of hormones, greatly enhancing our understanding of hormone action. Rizza et al. have developed an in vivo, FRET-based gibberellin biosensor, GIBBERELLIN PERCEPTION SENSOR 1 (GPS1), that incorporates portions of two GA-binding proteins,…

Temporal network analysis of mild drought in Brassica rapa

If you whithold water from a plant it eventually will wilt, but before this visible change there are other measurable effects and responses. However, many plant processes change cyclically over a 24-hour period independently of early drought responses, so it can be difficult to separate drought-responsive…

Phosphorus nutrition and root-associated fungal microbiota of nonmycorrhizal Arabis alpina

Associations with mycorrhizal fungi greatly enhance phosphorus (P) uptake for most plants, but the Brassicaceae are nonmycorrhizal due to the loss of essential symbiosis genes. Almario et al. investigated the fungal microbiota of Arabis alpina, a Brassicaceae species that grows in very-low P soils. The…