Recent Posts

Switching off Seed Maturation Genes in Seedlings

Chen et al identify AGL15 as a direct target of HSI2-dependent transcriptional repression in Arabidopsis seedlings https://doi.org/10.1105/tpc.17.00655. By Naichong Chen and Randy Allen Background: The developmental transition from seeds to seedlings is a critical step in the plant life cycle.…

Review: Auxin: a molecular trigger of seed development (Genes Devel.) ($)

Seeds are hugely important, providing the opportunity for reproductive dormancy in seed-bearing plants and as a nutrient-dense food source for animals. Seed development involves the formation of three genetically distinct tissues, the embryo, seed coat and endosperm. Although normally dependent on fertilization…

DNA methylation dynamics during early plant life

DNA methylation is extensively reprogrammed in the early embryo and germlines of mammals, whereas flowering plants do not show such extensive resetting except in the endosperm. Active DNA demethylation in the central cell and reduced activity of DNA methyltransferases leads to global hypomethylation…

Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination

Understanding the complex regulatory mechanisms that contribute to germination and seedling establishment requires integration of gene-expression, transcription factors (TFs), DNA methylation, smallRNA data, and their interactions. Narsai et al. describe the first dynamic transcription factor network…

Maternal components of RdDM are required for seed development in Brassica rapa

RNA directed DNA methylation (RdDM) is an epigenetic process in which plant double-strand RNAs are processed into small RNAs (sRNA) that add repressive DNA methylation to homologous DNA sequences. RdDM primarily acts on repetitive DNA and transposable elements (TEs). Despite its important biological…

Wheat research discovery yields genetic secrets that could shape future crops

A new study published in The Plant Cell has isolated a gene controlling shape and size of spikelets in wheat. Materials provided by the John Innes Centre. A new study has isolated a gene controlling shape and size of spikelets in wheat in a breakthrough which could help breeders deliver yield…

RH8-PP2CA interaction in ABA signaling ($)

It is well understood that abscisic acid (ABA) inhibits PPC2A phosphatase activity, which subsequently relieves phosphate-induced inhibition of a kinase interacting partner. This pathway composes the ‘core’ ABA signaling pathway, activating process involved in the ABA response such as stomatal closure…

GIF transcriptional coregulators control root meristem homeostasis ($)

Transcription factor GRFs (GROWTH-REGULATING FACTOR) are specifically expressed in TACs (transit-amplifying cells) and promote rapid cell divisions. Their expression is repressed in stem cells through miR396. In this work, they studied the functions of small cofactors known as GIFs (GRF-INTERACTING FACTORs)…

Trichome branching is regulated by the m6A reader ECT2 in Arabidopsis (OA)

Methylation at position N6 of adenosines (m6A) is the most abundant mRNA chemical modification. It influences gene activity at the post-transcriptional level and is thus important for development. m6A is decoded by reader proteins. While the repertoire of reader proteins has been extensively studied…