Tag: Genomics

This is such an engaging and though-provoking review article. I’d love to ask a group of students to think about what makes a tree a tree, including such questions as: How do we define trees? Do woody plants share a single origin? How many angiosperms are woody? The answer to those questions and more…

I expect we’ve all been captivated by images of the beautiful spiral chloroplasts in the Spirogyra genus of filamentous algae, and who could forget that name? A new paper by Goldbecker et al. presents the genome of Spirogyra pratensis, uncovering not only some insights into this remarkable structure,…

Pangenomes are amazing resources that provide glimpses into evolution that no single genome can capture. This new article by Dong et al. is a treat, as it describes the findings from a compilation of 138 bryophyte genomes, of which 123 are newly sequenced. Bryophytes are non-vascular plants (mosses,…

This year marks the 25th anniversary of the publication of the first genome sequence of a plant, Arabidopsis thaliana, (see https://doi.org/10.1038/35048692). As this review by Bevan et al. observes, this exciting accomplishment was met with some skepticism by those who felt that it was not likely to…

This year marks the 25th anniversary of the publication of the Arabidopsis genome, a milestone that lives large in those of us who experienced it and eagerly envisioned how this new knowledge would be used. The May 2025 issue of The Plant Cell focuses on how research on this little model plant has translated…

I’m sure many of you have experienced frustration when trying to access an intriguing dataset that either doesn’t exist, isn’t open, or is set up in an impossibly unintuitive manner. Part of that problem stems from a lack of training of early-career scientists in how to make their data findable,…

The transition of plants from aquatic to terrestrial environments occurred approximately 400 million years ago, leading to the diversification of two major lineages: tracheophytes (vascular plants) and bryophytes (non-vascular plants). While most studies on plant adaptation to environmental stressors…

Domesticated crops provide a reliable food source but generally have little genetic diversity to cope with environmental fluctuations. By decrypting the genome of wild species such as the wild rice Oryza rufipogon, we may identify additional genetic variation useful for breeding process. However, the…